Features
Import and process imaging data
Import and process your imaging data
- Handle any modality, at any scale, of any size:
- Bio-Formats
- Bitmap formats
- Microscopy: electron and optical
- Medical and neuroimage formats…
- Finite element modeling, geometric modeling, CAD
- Support for multi-data/multi-view, multi-channel, time series, very large data
- Scaling, calibration, conversion, re-sampling
- Image enhancement, comprehensive filtering and convolution, Fourier frequency transforms
- Artifact reduction algorithms
- Advanced multi-mode 2D/3D automatic registration
- Image stack alignment, arithmetic, correlation, fusion
Segmentation
Easily segment your imaging data
- Thresholding and auto-segmentation, object separation, automatic labeling
- Region growing, snakes, interpolation, wrapping, smoothing
- Morphological processing, including watershed and basins
- Machine Learning-based segmentation
- Automatic tracing of individual fibers and filaments
- Skeletonization and filament network extraction
- Interactive tools for generation or editing of segmentation and spatial graphs
- 3D surface reconstruction
- Grid generation for FEA/CFD
Presentation
Export your analysis and visualization work to seamlessly publish and present it
- Animation and video generation
- Advanced key frame and object animation
- Mix images, geometric models, measurements and simulations
- Annotations, measures legends, histograms and curve plots
- Export spreadsheets, 3D models, high-quality images
- Active and passive 3D stereo vision
- Single and tiled screen display
- Immersive environment
Visualize and explore
Visualize and explore your imaging data
- Interactive high-quality volume and multichannel visualization
- Orthogonal, oblique, cylindrical and curved slicing
- Contouring and iso-surface extraction
- Maximum Intensity or other types of projections
- Vector and tensor visualization
- Objects and tracks
- Molecular visualization
Analysis and quantification
Analyze your imaging data and obtain quantitative information
- Intuitive recipe creation, customization, automated replay
- Built-in measurements, including counts, volumes, areas, perimeters, aspect ratios and orientations
- User-defined measures
- Results viewer with spreadsheet tool and charting
- Automatic individual feature measurements, 3D localization and spreadsheet selection
- Automated statistics, distribution graphs
- Feature filtering using any measurement criterion
- Data registration, deformation, comparison and measurements
Customization
Easily and quickly adapt Amira Software to your specific needs
- Custom C++ modules development
- MATLAB™ bridge
- Python scripting API